User-Supplied Reagents

Consumable

Supplier

Lab Designation

Bleach (6–8.5% sodium hypochlorite)

General lab supplier

Pre-amp and post-amp

Deionized water (DI H2O)

General lab supplier

Pre-amp and post-amp

Dimethylsulfoxide (DMSO)

Sigma, catalog # D8418, or lab grade DMSO CAS# 67-68-5

Post-amp, EX only

EDTA, 0.5 M

EMD Chemicals, catalog # 4056

Sigma-Aldrich, catalog # E7889

Post-amp

Ethanol, 100%

General lab supplier

Post-amp

Formamide, OmniPur

VWR, Int'l, catalog # EM-4650

Post-amp, non-EX

Isopropanol (2-propanol), 100%

General lab supplier

Post-amp

Mild detergent, such as Alconox® Powder Detergent

VWR, Int'l, catalog # 21835

Post-amp

Sodium hydroxide solution to prepare a 0.1 N dilution in DI H2O (for example 10 N, 1 N NaOH)

General lab supplier

Pre-amp

TE, 1X

10 mM Tris-HCl, pH 8.0, 1 mM EDTA
For diluting DNA

General lab supplier

Post-amp

Algecide, such as Aqua-Clear

VWR, Int'l, catalog # 13197-144

Or Bel-Art Products catalog # F17093-0000

Post-amp

EZ-96 DNA Methylation-Lightning MagPrep

Zymo Research, catalog # D5046, D5047

Pre-amp, for EX Methylation workflows only