Configure Email Notifications

The MiSeq instrument can be configured to send an email notification when primary analysis is complete, when on-instrument secondary analysis is complete, or if a critical error occurs during a sequencing run.

1. From the Main Menu, select System Settings.
2. Select the Email Notifications tab.
3. Enter the following information:
• Local SMTP email server address (required)—Enter the local SMTP email server address (e.g. smtp.domain.com) using an external or on-screen keyboard. If necessary, consult the facility administrator for this information.
• Sender address (required)—Enter the sender email address using the on-screen keyboard. This can be your personal email address or a designated address for sending email notifications.
• Recipient addresses—Enter the email addresses of all recipients who are to receive the notifications. Separate each email address with a comma. Select Test to send a test email to notification recipients.
• Notify via email when—Select the checkboxes that correspond to the run events for which you want to receive email notifications.

If selecting the Notify via Email when[...] option, on-instrument analysis is complete, email notifications will only be received if the run is not configured to send sequencing data to the BaseSpace Sequence Hub.