Sequencing Analysis Viewer

Use Illumina Sequencing Analysis Viewer (SAV) to enhance run monitoring without affecting the ongoing process. The MiSeq must be networked to view primary analysis results with SAV.

SAV allows you to review real-time metrics as they are generated during a run, and later after a run has completed. Install SAV on a separate computer independent of the MiSeq with access to the same network connected to the instrument. After launching the software, navigate to the output folder for your run.

Following template generation, SAV provides metrics generated by RTA and organizes the metrics into plots, graphs, and tables.

SAV is universal to Illumina sequencing systems, most of which use an 8-lane flow cell. Certain views include drop-down lists showing lanes 1–8. Because the MiSeq flow cell comprises a single lane, select All or Lane 1. For more information, refer to the Sequencing Analysis Viewer v3.0 Product Documentation (# 200034027).