Sequencing Output Folder Structure

The control software generates the output folder name automatically.

Data

Intensities

BaseCalls

L001—Base call files for lane 1, aggregated in one file per cycle.

L002—Base call files for lane 2, aggregated in one file per cycle.

L003—Base call files for lane 3, aggregated in one file per cycle.

L004—Base call files for lane 4, aggregated in one file per cycle.

L001—An aggregated *.locs file for lane 1.

L002—An aggregated *.locs file for lane 2.

L003—An aggregated *.locs file for lane 3.

L004—An aggregated *.locs file for lane 4.

Images

Focus

L001—Focus images for lane 1.

L002—Focus images for lane 2.

L003—Focus images for lane 3.

L004—Focus images for lane 4.

InterOp—Binary files used by Sequencing Analysis Viewer (SAV).

Logs—Log files describing operational steps.

Recipe—Run-specific recipe file named with reagent cartridge ID.

RTALogs—Log files describing analysis steps.

Thumbnail_Images—Thumbnail images for tiles 1, 6, and 12 in each swath at every cycle.

RTAComplete.xml

RTAConfiguration.xml

RunInfo.xml

RunNotes.xml

RunParameters.xml