Synthesize First Strand cDNA
This step reverse transcribes the RNA fragments primed with random hexamers into first strand cDNA using reverse transcriptase.
Consumables
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RVT (Reverse Transcriptase) |
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1.7 ml microcentrifuge tubes (1 per 96-well sample plate) |
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Microseal 'B' adhesive seal |
Preparation
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1.
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Prepare the following consumables: |
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RVT—Invert to mix before each use. |
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2.
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Save the following IMAP FSS program on the thermal cycler: |
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Choose the preheat lid option at 105°C |
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Set the reaction volume to 25 µl |
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25°C for 5 minutesOpt Option |
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50°C for 10 minutesOpt Option |
Optimization Options
You can optimize the 25°C and 50°C reverse transcription steps by altering the temperature and incubation times. 50°C is the maximum recommended temperature for this RT enzyme. cDNA synthesis may be improved at lower temperatures (~42°C).
Procedure
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1.
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In a 1.7 ml tube, combine the following volumes to prepare FSM. Multiply each volume by the number of samples. |
Reagent overage is included to account for small pipetting errors.
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2.
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Add 8 µl FSM to each well of the CDNA1 plate. |
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3.
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Seal and shake at 1600 rpm for 1 minute. |
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4.
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Centrifuge at 1000 × g for 1 minute. |
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5.
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Place on the preprogrammed thermal cycler and run the IMAP FSS program. |
SAFE STOPPING POINT
If you are stopping, seal the plate and store at ‑25°C to ‑15°C for up to 7 days.