TruSeq Small RNA Indexes

TruSeq Small RNA Indexes A, B, C, and D each contain 12 unique indexes for single indexing.

The following table shows pooling strategies for two to four libraries generated with index adapters from each set. For 5–11‑plex pools, use the 4-plex options with any adapters.

Plexity

Option

Set A Only

Set B Only

Set C Only*

Set D Only

2

1

RPI6 and RPI12

Not recommended

Not recommended

RPI37 and RPI45

3

1

RPI1, RPI3, and RPI7

RPI16, RPI17, and RPI18

Not recommended

 

 

RPI38, RPI44, and RPI46

2

RPI2, RPI4, and RPI8

RPI13, RPI17, and RPI23

RPI40, RPI47, and RPI48

3

Two-plex option with any other adapter

Not recommended

Two-plex option with any other adapter

4

1

RPI2, RPI9, RPI10, and PRI11

Three-plex option with any other adapter

 

 

Not recommended

 

 

RPI37, RPI39, RPI42, and RPI43

2

RPI4, RPI5, RPI6, and RPI7

RPI37, RPI38, RPI45, and RPI46

3

Three-plex option with any other adapter

Three-plex option with any other adapter

* Always combine TruSeq Small RNA Indexes C with another TruSeq Small RNA Indexes set.