NextSeq 1000/2000 Integration v2.1.1 Release Notes

The following release notes detail the key changes to software components for the BaseSpace Clarity LIMS NextSeq 1000/2000 Integration Package v2.1.1.

This update addresses Apache log4j vulnerabilities found in prior versions of the NextSeq 1000/2000 Integration Package.

Compatibility

This version of the integration package is compatible with the following software:

BaseSpace Clarity LIMS v5.3 and later
NextSeq 1000/2000 Instrument Control Software v1.1 and later (up to v1.4 only)

If you are currently using Clarity LIMS NextSeq1000/2000 Integration v.2.1.0, contact Illumina Support to update to v2.1.1.

Defect Repairs

This is a patch release to address the following Apache log4j vulnerabilities:

CVE-2021-44228
CVE-2021-45046
CVE-2021-45105
CVE-2021-44832

Known Issues

A sequencing run error is triggered when instrument disk space is full. This error causes RunParameters.xml to be empty and the run event is not processed on Clarity LIMS.

This error is unlikely to occur as pre-run checks on the instrument check for sufficient disk space before run is started.