Block List

The following table lists the genes that have associated block listed sites. For the exact location of the block listed site, contact Illumina Technical Support.

Gene

Number of Block List Sites

Gene

Number of Block List Sites

Gene

Number of Block List Sites

ABL1

5

FGFR2

144

PAX7

5

AKT2

5

FGFR3

1

PAX8

275

AKT3

20

FGFR4

36

PBRM1

3

ALK

90

FLCN

2

PDCD1

2

ANKRD11

6

FLI1

36

PDGFRA

5

ANKRD26

9

FLT1

91

PDGFRB

2

AR

81

FLT4

3

PDK1

1

ARID1A

40

FOXA1

48

PDPK1

6

ARID1B

87

FOXL2

4

PGR

5

ARID2

1

FOXO1

2

PHF6

2

ASXL1

3

FOXP1

3

PHOX2B

15

ASXL2

5

FUBP1

1

PIK3C2G

2

ATM

2

GATA4

6

PIK3CA

18

ATR

3

GATA6

12

PIK3CB

42

ATRX

17

GEN1

1

PIK3R1

6

AURKA

1

GID4

3

PIK3R2

2

AXIN2

4

GNAQ

4

PLCG2

3

AXL

74

GNAS

11

PLK2

2

BBC3

2

GPR124

3

PMAIP1

7

BCL10

2

GRM3

1

PMS2

1

BCL2L11

16

H3F3A

1

POLE

3

BCOR

2

H3F3C

2

PPARG

446

BCORL1

1

HGF

1

PRDM1

1

BCR

64

HIST1H1C

2

PRKCI

2

BIRC3

1

HLA-A

72

PRKDC

5

BLM

4

HNF1A

2

PTCH1

13

BMPR1A

4

HNRNPK

9

PTEN

41

BRAF

283

HOXB13

1

PTPRS

14

BRCA1

49

HSP90AA1

4

PTPRT

2

BRCA2

21

ICOSLG

6

QKI

2

BRD4

16

IFNGR1

2

RAD21

1

CARD11

4

iIndel

91

RAD50

5

CASP8

2

INHBA

4

RAD51

18

CBL

8

INPP4A

1

RAD51B

8

CCND1

25

INPP4B

1

RAF1

98

CCND3

49

IRS1

9

RANBP2

12

CCNE1

72

IRS2

19

RARA

2

CD74

50

iSNP

4

RASA1

1

CDH1

4

JAK2

4

RB1

5

CDK12

3

JUN

7

RBM10

13

CDK4

46

KAT6A

5

RECQL4

3

CDK6

13

KDM5A

7

REL

3

CDK8

4

KDM5C

2

RET

3

CDKN2B

2

KDM6A

2

RFWD2

22

CEBPA

12

KDR

1

RICTOR

1

CHD2

5

KIF5B

7

ROS1

287

CHD4

12

KIT

5

RPS6KA4

3

CHEK1

75

KMT2B

51

RPS6KB1

109

CHEK2

64

KMT2C

118

RUNX1

3

chrY

93

KMT2D

108

SDHA

18

CIC

2

KRAS

44

SDHB

3

CREBBP

4

LAMP1

64

SDHD

17

CSNK1A1

4

LATS1

1

SETBP1

7

CTNNB1

1

LATS2

4

SETD2

26

CUL3

1

LoH

85

SF3B1

1

CUX1

9

LRP1B

3

SH2B3

4

DAXX

5

LZTR1

1

SH2D1A

2

DDR2

1

MAGI2

2

SLIT2

1

DDX41

1

MALT1

4

SLX4

2

DIS3

2

MAP2K2

1

SMARCA4

4

DNAJB1

6

MAP2K4

5

SMC1A

1

DNMT1

1

MAP3K1

8

SMC3

8

DNMT3A

4

MAP3K14

2

SMO

2

DOT1L

2

MAP3K4

10

SOX10

7

E2F3

70

MAPK1

6

SOX17

1

EGFR

304

MAPK3

6

SOX9

14

EIF4E

12

MCL1

1

SPEN

4

EML4

9

MDC1

23

STAG1

5

EP300

1

MDM2

53

STAG2

2

ERBB2

14

MDM4

67

STAT4

1

ERBB3

62

MED12

28

STAT5A

1

ERCC1

53

MGA

6

STAT5B

4

ERCC2

57

MLL

9

SUFU

5

ERCC3

4

MLLT3

18

SUZ12

9

ERCC5

4

MRE11A

5

TAF1

9

ERG

2

MSH3

10

TBX3

1

ESR1

32

MSH6

2

TCEB1

1

ETS1

45

MSI

148

TCF3

2

ETV1

862

MST1

18

TCF7L2

6

ETV4

502

MYB

402

TERT

2

ETV5

11

MYC

78

TET1

1

ETV6

187

MYCL1

28

TET2

23

EWSR1

364

MYCN

69

TFE3

299

EZH2

2

MYOD1

3

TFRC

33

FANCA

1

NAB2

10

TGFBR1

6

FANCD2

11

NCOA3

28

TGFBR2

2

FANCG

10

NCOR1

9

TMEM127

5

FANCI

1

NF1

3

TMPRSS2

236

FANCL

1

NKX2-1

4

TOP2A

1

FAT1

2

NOTCH1

4

TP53

22

FBXW7

4

NOTCH3

7

TRAF7

4

FGF1

25

NOTCH4

9

TSC1

4

FGF10

17

NPM1

5

TSC2

1

FGF14

15

NRAS

29

U2AF1

1

FGF19

102

NRG1

47

VEGFA

7

FGF2

26

NTRK1

134

WISP3

2

FGF23

38

NTRK2

145

WT1

10

FGF3

60

NTRK3

13

XIAP

1

FGF4

25

NUTM1

134

XPO1

2

FGF5

14

PAK1

68

XRCC2

1

FGF6

9

PAK3

8

YAP1

1

FGF7

9

PALB2

1

ZBTB7A

11

FGF8

30

PARK2

23

ZFHX3

56

FGF9

21

PARP1

2

ZNF703

7

FGFR1

26

PAX3

156

ZRSR2

2