Statistics Output File
Additional statistics are provided in the files in <output-directory>/sv/results/stats.
|
File |
Description |
|---|---|
|
alignmentStatsSummary.txt |
Fragment length quantiles for each input alignment file. |
|
svLocusGraphStats.tsv |
Statistics and runtime information pertaining to the SV locus graph. |
|
svCandidateGenerationStats.tsv |
Statistics and runtime information pertaining to the SV candidate generation. |
|
svCandidateGenerationStats.xml |
XML data backing the svCandidateGenerationStats.tsv report. |
|
diploidSV.sv_metrics.csv |
The number of passing SV calls under a diploid model. This file is only produced in the germline analysis, or tumor-normal analysis. |
|
somaticSV.sv_metrics.csv |
The number of passing SV calls under a somatic variant model. This file is only produced in the tumor-normal analysis. |
|
tumorSV.sv_metrics.csv |
The number of passing SV calls in the tumor-only analysis. This file is only produced in the tumor-only analysis. |
