Somatic CNV Caling

Depending on your workflow, you can use the following somatic CNV callers.

For whole-genome sequencing (WGS), use the Somatic WGS CNV Caller. For more information, see Somatic WGS CNV Calling.
For whole-exome sequencing (WES), use the Somatic WES CNV Caller. For more information, see Somatic WES CNV Calling