Overview

DRAGEN for Illumina Cell-Free DNA Prep with Enrichment supports analysis of Illumina Cell-Free DNA Prep with Enrichment libraries. This resource provides instructions for configuring analysis using the following options:.

Illumina Run Manager—Plan a run with analysis.
BaseSpace Sequence Hub—Analyze data, plan a run with analysis, or generate a sample sheet.
Illumina Connected Analytics—Analyze data.
DRAGEN server—Analyze data.

Analysis Methods

The software performs the following workflows to analyze sequencing data. For descriptions of analysis methods, refer to Illumina DRAGEN Analysis Workflows.

FASTQ Generation
DNA Mapping and Aligning
DRAGEN Somatic Small Variant Caller (Tumor Only)
Copy Number Variant Caller
Structural Variant Caller
Variant annotation